Fixed a bug to make RSEM generated BAM file valid input for RSEM

[rsem.git] / README.md

diff --git a/README.md b/README.md
index 8ce3d3897062541a335c291ef9c6dfed89e833f4..1e64574d8683f73779cad2bc95a32eb9001c1d52 100644 (file)
--- a/README.md
+++ b/README.md
@@ -174,7 +174,7 @@ Here are some guidance for visualizing transcript coordinate files using IGV:
 
 1) Import the transcript sequences as a genome 
 
-Select File -> Import Genome, then fill in ID, Name and Fasta file. Fasta file should be 'reference_name.transcripts.fa'. After that, click Save button. Suppose ID is filled as 'reference_name', a file called 'reference_name.genome' will be generated. Next time, we can use: File -> Load Genome, then select 'reference_name.genome'.
+Select File -> Import Genome, then fill in ID, Name and Fasta file. Fasta file should be 'reference_name.idx.fa'. After that, click Save button. Suppose ID is filled as 'reference_name', a file called 'reference_name.genome' will be generated. Next time, we can use: File -> Load Genome, then select 'reference_name.genome'.
 
 2) Load visualization files