Add a validator for input SAM/BAM file

[rsem.git] / EM.cpp

diff --git a/EM.cpp b/EM.cpp
index b2493b2fa21982125b0cba196325ca86487848c6..f8849790d5a35b3f3dbeaf16b26a2415558b1f0e 100644 (file)
--- a/EM.cpp
+++ b/EM.cpp
@@ -503,7 +503,7 @@ void EM() {
 
                if (verbose) printf("ROUND = %d, SUM = %.15g, bChange = %f, totNum = %d\n", ROUND, sum, bChange, totNum);
        } while (ROUND < MIN_ROUND || (totNum > 0 && ROUND < MAX_ROUND));
-         //while (ROUND < MAX_ROUND);
+//     } while (ROUND < 1);
 
        if (totNum > 0) fprintf(stderr, "Warning: RSEM reaches %d iterations before meeting the convergence criteria.\n", MAX_ROUND);
 
@@ -748,7 +748,7 @@ int main(int argc, char* argv[]) {
 
        time_t b = time(NULL);
 
-       printTimeUsed(a, b);
+       printTimeUsed(a, b, "EM.cpp");
 
        return 0;
 }