Included EBSeq for downstream differential expression analysis

[rsem.git] / EBSeq / man / GetMultiPP.Rd

diff --git a/EBSeq/man/GetMultiPP.Rd b/EBSeq/man/GetMultiPP.Rd
new file mode 100644 (file)
index 0000000..843b362
--- /dev/null
+++ b/EBSeq/man/GetMultiPP.Rd
@@ -0,0 +1,47 @@
+\name{GetMultiPP}
+\alias{GetMultiPP}
+%- Also NEED an '\alias' for EACH other topic documented here.
+\title{
+Generate the Posterior Probability of each transcript.
+}
+\description{
+Generate the Posterior Probability of being each pattern of each transcript based on the EBMultiTest output.
+}
+\usage{
+GetMultiPP(EBout)
+}
+%- maybe also 'usage' for other objects documented here.
+\arguments{
+  \item{EBout}{
+The output of EBMultiTest function.
+}
+
+}
+\details{
+%%  ~~ If necessary, more details than the description above ~~
+}
+\value{
+\item{PP}{The poster probabilities of being each pattern.}
+\item{MAP}{The most likely pattern each gene belongs to}
+\item{Patterns}{The Patterns}
+}
+\references{
+}
+\author{
+Ning Leng
+}
+
+%% ~Make other sections like Warning with \section{Warning }{....} ~
+
+\seealso{
+}
+\examples{
+##---- Should be DIRECTLY executable !! ----
+##-- ==>  Define data, use random,
+##--   or do  help(data=index)  for the standard data sets.
+
+## The function is currently defined as
+}
+% Add one or more standard keywords, see file 'KEYWORDS' in the
+% R documentation directory.
+\keyword{ Posterior Probability }