RF: replace old-fashioned neurodebian.cfg with neurodebian_repo.cfg

diff --git a/Makefile b/Makefile
index 5f4732e1a8b1e697b2d04338beb6d4ac8c582f93..124f83757b15a9f70a81a9c17ba47121f0e8dc21 100644 (file)
--- a/Makefile
+++ b/Makefile
@@ -4,7 +4,7 @@ WWW_DIR = build/html/
 
 WWW_UPLOAD_URI_STATIC=$(WWW_UPLOAD_URI)/_static
 
-BIGMESS_OPTS = -c neurodebian_repo.cfg
+BIGMESS_OPTS = -c neurodebian.cfg
 BIGMESS_CMD = PYTHONPATH=.:3rd/bigmess:$(PYTHONPATH) 3rd/bigmess/bin/bigmess
 BIGMESS = $(BIGMESS_CMD) $(BIGMESS_OPTS)
 

diff --git a/neurodebian.cfg b/neurodebian.cfg
index 541206d5fa9267bb302cc8caaadd6d3f79901cdb..ca78e5882f9092c809a2b3fc74ba60a67540347f 100644 (file)
--- a/neurodebian.cfg
+++ b/neurodebian.cfg
@@ -1,72 +1,3 @@
-[dde]
-pkgquery_url = http://dde.debian.net/dde/q/udd
-
-[packages]
-# Packages listed in the following taskfiles will be featured on the website
-# _if_ they are also present in the repository
-select taskfiles =
- svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/distributedcomputing
- svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/bci
- svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/electrophysiology
- svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/neuroscience-cognitive
- svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/neuroscience-datasets
- svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/neuroscience-modeling
- svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/psychophysics
- svn://svn.debian.org/blends/projects/med/trunk/debian-med/tasks/imaging
- svn://svn.debian.org/blends/projects/med/trunk/debian-med/tasks/imaging-dev
- svn://svn.debian.org/blends/projects/med/trunk/debian-med/tasks/psychology
-
-# Additional selection filter (similar to 'select taskfiles'), only listing
-# package names
-select names = libnifti2 odin mitools afni-atlases python-pyssdh python-networkx
- r-cran-glmnet python-rpy2 python-nibabel-snapshot
- python-sklearn python-scikits-learn python-mdp python-mlpy python-openpyxl libgdf-dev matlab-support
- svgtune rorden-mri-tutorial caret-data python-joblib python-sphinx fail2ban
- python-pandas python-skimage neurodebian numdiff nuitka pytables
- guacamole freeipmi remake vowpal-wabbit tigervnc
-
-# Information about prospective packages to be imported from taskfiles
-prospective =
- svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/distributedcomputing
- svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/bci
- svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/electrophysiology
- svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/neuroscience-cognitive
- svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/neuroscience-datasets
- svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/neuroscience-modeling
- svn://svn.debian.org/blends/projects/science/trunk/debian-science/tasks/psychophysics
- svn://svn.debian.org/blends/projects/med/trunk/debian-med/tasks/imaging
- svn://svn.debian.org/blends/projects/med/trunk/debian-med/tasks/imaging-dev
-
-[blend package aliases]
-# alias a package name from a blend taskfile to an arbitray number of additional
-# package names -- if the original name should appear in the package list it has
-# to be added as an alias as well
-cctools = coop-computing-tools
-mni-icbm152-nlin-2009 = mni-icbm152-nlin-2009a mni-icbm152-nlin-2009b mni-icbm152-nlin-2009c
-eeglab = matlab-eeglab11 eeglab11-sampledata
-fsl = fsl fsl-doc fsl-atlases fsl-possum-data fsl-first-data fsl-feeds fsl-mni152-templates
-fslview = fslview fslview-doc
-python-mvpa = python-mvpa python-mvpa2
-libgiftiio-dev = libgiftiio-dev gifti-bin
-openmeeg-tools = openmeeg-tools libopenmeeg-dev python-openmeeg libopenmeeg1
-libbiosig-dev = libbiosig-dev python-biosig octave-biosig biosig-tools libbiosig0
-libgdf-dev = libgdf-dev libgdf0 libgdf0-dbg libgdf-dev gdf-tools octave-gdf matlab-gdf
-spm8 = matlab-spm8 spm8-data spm8-doc
-libfreenect-dev = libfreenect0.0 libfreenect-dev libfreenect-demos python-freenect freenect
-psychtoolbox-3 = octave-psychtoolbox-3 matlab-psychtoolbox-3 psychtoolbox-3-doc
-openmeeg = libopenmeeg-dev libopenmeeg1 openmeeg-tools python-openmeeg
-pandas = python-pandas
-pysurfer = python-surfer
-pyxnat = python-pyxnat
-openwalnut = openwalnut-qt4
-neurodebian = neurodebian-dev neurodebian-desktop neurodebian-keyring neurodebian-popularity-contest neurodebian-guest-additions
-pytables = python-tables
-isis = isis-utils libisis-core-dev python-isis libisis-ioplugins-common libisis-ioplugins-dicom libisis-qt4-dev
-guacamole = guacamole guacd libguac-dev libguac3 libguac-client-rdp guacamole-tomcat libguac-client-vnc0
-neo = python-neo
-openvibe = openvibe-bin openvibe-data openvibe-dev openvibe-libs openvibe-plugins
-tigervnc = tigervnc-viewer tigervnc-xorg-extension tigervnc-standalone-server tigervnc-scraping-server tigervnc-common
-
 [mirrors]
 au = http://mirror.aarnet.edu.au/pub/neurodebian
 de-m = http://neurodebian.g-node.org
@@ -91,25 +22,36 @@ us-ca = USA-CA (Paul Ivanov, California)
 us-nh = USA-NH (Dartmouth College)
 us-tn = USA-TN (Vanderbilt)
 
-[neurodebian]
+[release files]
 # Release files of all repositories to be contained in the website
-# Package info files for all these releases will be downloaded. A long list
-# of releases makes a website update a lot slower
-releases =
- http://neuro.debian.net/debian/dists/data/Release
- http://neuro.debian.net/debian/dists/hardy/Release
- http://neuro.debian.net/debian/dists/karmic/Release
- http://neuro.debian.net/debian/dists/lucid/Release
- http://neuro.debian.net/debian/dists/maverick/Release
- http://neuro.debian.net/debian/dists/natty/Release
- http://neuro.debian.net/debian/dists/oneiric/Release
- http://neuro.debian.net/debian/dists/precise/Release
- http://neuro.debian.net/debian/dists/quantal/Release
- http://neuro.debian.net/debian/dists/squeeze/Release
- http://neuro.debian.net/debian/dists/wheezy/Release
- http://neuro.debian.net/debian/dists/sid/Release
+# Package info files for all these releases will be downloaded.
+data = http://neuro.debian.net/debian/dists/data/Release
+hardy = http://neuro.debian.net/debian/dists/hardy/Release
+#EOL karmic = http://neuro.debian.net/debian/dists/karmic/Release
+lucid = http://neuro.debian.net/debian/dists/lucid/Release
+#EOL maverick = http://neuro.debian.net/debian/dists/maverick/Release
+#EOL natty = http://neuro.debian.net/debian/dists/natty/Release
+oneiric = http://neuro.debian.net/debian/dists/oneiric/Release
+precise = http://neuro.debian.net/debian/dists/precise/Release
+quantal = http://neuro.debian.net/debian/dists/quantal/Release
+squeeze = http://neuro.debian.net/debian/dists/squeeze/Release
+wheezy = http://neuro.debian.net/debian/dists/wheezy/Release
+sid = http://neuro.debian.net/debian/dists/sid/Release
 
-[release codenames]
+[release bases]
+debian = http://amd64-geomirror.debian.net/debian
+ubuntu = http://de.archive.ubuntu.com/ubuntu
+
+[task files]
+datasets = http://anonscm.debian.org/gitweb/?p=pkg-exppsy/neurodebian-blend.git;a=blob_plain;f=tasks/datasets
+distributedcomputing = http://anonscm.debian.org/gitweb/?p=pkg-exppsy/neurodebian-blend.git;a=blob_plain;f=tasks/distributedcomputing
+education = http://anonscm.debian.org/gitweb/?p=pkg-exppsy/neurodebian-blend.git;a=blob_plain;f=tasks/education
+electrophysiology = http://anonscm.debian.org/gitweb/?p=pkg-exppsy/neurodebian-blend.git;a=blob_plain;f=tasks/electrophysiology
+mri = http://anonscm.debian.org/gitweb/?p=pkg-exppsy/neurodebian-blend.git;a=blob_plain;f=tasks/mri
+neuralmodeling = http://anonscm.debian.org/gitweb/?p=pkg-exppsy/neurodebian-blend.git;a=blob_plain;f=tasks/neuralmodeling
+psychophysics = http://anonscm.debian.org/gitweb/?p=pkg-exppsy/neurodebian-blend.git;a=blob_plain;f=tasks/psychophysics
+
+[release names]
 # each item here will result in the respective release being advertised
 # on the website, i.e. sources.list being available and config form contains
 # a corresponding item -- please prune an entry when a release is no longer
@@ -117,7 +59,7 @@ releases =
 # the 'data' entry should not be changed, as this exact setting also serves as
 # a test condition in the DDE code
 data = Datasets (data)
-#etch = Debian GNU/Linux 4.0 (etch)
+etch = Debian GNU/Linux 4.0 (etch)
 lenny = Debian GNU/Linux 5.0 (lenny)
 squeeze = Debian GNU/Linux 6.0 (squeeze)
 wheezy = Debian testing (wheezy)
@@ -125,7 +67,7 @@ sid = Debian unstable (sid)
 # EOL: May 12 2011 (Desktop) April 2013 (Server)
 hardy = Ubuntu 08.04 LTS "Hardy Heron" (hardy)
 # EOL: Oct 23 2010
-#jaunty = Ubuntu 09.04 "Jaunty Jackalope" (jaunty)
+jaunty = Ubuntu 09.04 "Jaunty Jackalope" (jaunty)
 # EOL: April 2011
 karmic = Ubuntu 09.10 "Karmic Koala" (karmic)
 # EOL: April 2013 (Desktop) April 2015 (Server)
@@ -141,61 +83,8 @@ precise = Ubuntu 12.04 LTS "Precise Pangolin" (precise)
 # EOL: April 2014
 quantal = Ubuntu 12.10 "Quantal Quetzal" (quantal)
 
-[release backport ids]
-# the purpose of these ids is to have version suffixes for backported packages
-# that allow proper sorting (upgradability) across distribution releases
-# For Debian we'll use ndXX (where XX is the version of the Debian release,
-# e.g. 50; analog to backports.org) and for Ubuntu we'll use ndXX.XX.
-data = nd
-etch = nd40
-lenny = nd50
-squeeze = nd60
-wheezy = nd70
-sid = nd
-hardy = nd08.04
-intrepid = nd08.10
-jaunty = nd09.04
-karmic = nd09.10
-lucid = nd10.04
-maverick = nd10.10
-natty = nd11.04
-oneiric = nd11.10
-precise = nd12.04
-quantal = nd12.10
-
-[nitrc ids]
-afni = 23
-ants = 130
-camino = 253
-caret = 34
-cmtk = 212
-connectomeviewer = 355
-dicomnifti = 218
-fsl = 25
-fslview = 25
-gifti-bin = 75
-imagej = 256
-itksnap = 110
-jist = 228
-libminc-dev = 129
-libgiftiio-dev = 75
-libnifti2 = 26
-libnifti-dev = 26
-matlab-spm8 = 24
-minc-tools = 129
-mipav = 70
-mitools = 153
-mricron = 152
-mrtrix = 128
-nifti-bin = 26
-odin = 153
-python-mvpa = 162
-python-nipype = 325
-python-surfer = 517
-python-pyxnat = 453
-slicer = 50
-spm8 = 24
-voxbo = 73
-openmeeg = 514
-bioimagesuite = 51
-
+[metadata]
+# base url: <url>/<src_pkg-name>/<file>
+source extracts baseurl = http://neuro.debian.net/debian/extracts
+# files to query
+source extracts filenames = upstream README.Debian copyright

diff --git a/neurodebian_repo.cfg b/neurodebian_repo.cfg
deleted file mode 100644 (file)
index ca78e58..0000000
--- a/neurodebian_repo.cfg
+++ /dev/null
@@ -1,90 +0,0 @@
-[mirrors]
-au = http://mirror.aarnet.edu.au/pub/neurodebian
-de-m = http://neurodebian.g-node.org
-de-md = http://neurodebian.ovgu.de/debian
-de-v = http://nd.zetatech.org
-gr = http://neurobot.bio.auth.gr/neurodebian
-jp = http://neuroimaging.sakura.ne.jp/neurodebian
-ua = http://www.neuro.webdisk.com.ua
-us-ca = http://neurodeb.pirsquared.org
-us-nh = http://neuro.debian.net/debian
-us-tn = http://masi.vuse.vanderbilt.edu/neurodebian
-
-[mirror names]
-au = Australia (AARNET)
-de-m = Germany (G-Node, LMU Munich)
-de-md = Germany (University of Magdeburg)
-de-v = Germany (Nikolaus Valentin Haenel, Vogtland)
-gr = Greece (Aristotle University of Thessaloniki)
-jp = Japan (Kiyotaka Nemoto)
-ua = Ukraine (Iaroslav Iurchenko)
-us-ca = USA-CA (Paul Ivanov, California)
-us-nh = USA-NH (Dartmouth College)
-us-tn = USA-TN (Vanderbilt)
-
-[release files]
-# Release files of all repositories to be contained in the website
-# Package info files for all these releases will be downloaded.
-data = http://neuro.debian.net/debian/dists/data/Release
-hardy = http://neuro.debian.net/debian/dists/hardy/Release
-#EOL karmic = http://neuro.debian.net/debian/dists/karmic/Release
-lucid = http://neuro.debian.net/debian/dists/lucid/Release
-#EOL maverick = http://neuro.debian.net/debian/dists/maverick/Release
-#EOL natty = http://neuro.debian.net/debian/dists/natty/Release
-oneiric = http://neuro.debian.net/debian/dists/oneiric/Release
-precise = http://neuro.debian.net/debian/dists/precise/Release
-quantal = http://neuro.debian.net/debian/dists/quantal/Release
-squeeze = http://neuro.debian.net/debian/dists/squeeze/Release
-wheezy = http://neuro.debian.net/debian/dists/wheezy/Release
-sid = http://neuro.debian.net/debian/dists/sid/Release
-
-[release bases]
-debian = http://amd64-geomirror.debian.net/debian
-ubuntu = http://de.archive.ubuntu.com/ubuntu
-
-[task files]
-datasets = http://anonscm.debian.org/gitweb/?p=pkg-exppsy/neurodebian-blend.git;a=blob_plain;f=tasks/datasets
-distributedcomputing = http://anonscm.debian.org/gitweb/?p=pkg-exppsy/neurodebian-blend.git;a=blob_plain;f=tasks/distributedcomputing
-education = http://anonscm.debian.org/gitweb/?p=pkg-exppsy/neurodebian-blend.git;a=blob_plain;f=tasks/education
-electrophysiology = http://anonscm.debian.org/gitweb/?p=pkg-exppsy/neurodebian-blend.git;a=blob_plain;f=tasks/electrophysiology
-mri = http://anonscm.debian.org/gitweb/?p=pkg-exppsy/neurodebian-blend.git;a=blob_plain;f=tasks/mri
-neuralmodeling = http://anonscm.debian.org/gitweb/?p=pkg-exppsy/neurodebian-blend.git;a=blob_plain;f=tasks/neuralmodeling
-psychophysics = http://anonscm.debian.org/gitweb/?p=pkg-exppsy/neurodebian-blend.git;a=blob_plain;f=tasks/psychophysics
-
-[release names]
-# each item here will result in the respective release being advertised
-# on the website, i.e. sources.list being available and config form contains
-# a corresponding item -- please prune an entry when a release is no longer
-# supported
-# the 'data' entry should not be changed, as this exact setting also serves as
-# a test condition in the DDE code
-data = Datasets (data)
-etch = Debian GNU/Linux 4.0 (etch)
-lenny = Debian GNU/Linux 5.0 (lenny)
-squeeze = Debian GNU/Linux 6.0 (squeeze)
-wheezy = Debian testing (wheezy)
-sid = Debian unstable (sid)
-# EOL: May 12 2011 (Desktop) April 2013 (Server)
-hardy = Ubuntu 08.04 LTS "Hardy Heron" (hardy)
-# EOL: Oct 23 2010
-jaunty = Ubuntu 09.04 "Jaunty Jackalope" (jaunty)
-# EOL: April 2011
-karmic = Ubuntu 09.10 "Karmic Koala" (karmic)
-# EOL: April 2013 (Desktop) April 2015 (Server)
-lucid = Ubuntu 10.04 LTS "Lucid Lynx" (lucid)
-# EOL: April 2012
-maverick = Ubuntu 10.10 "Maverick Meerkat" (maverick)
-# EOL: October 2012
-natty = Ubuntu 11.04 "Natty Narwhal" (natty)
-# EOL: April 2013
-oneiric = Ubuntu 11.10 "Oneiric Ocelot" (oneiric)
-# EOL: April 2017 (LTS)
-precise = Ubuntu 12.04 LTS "Precise Pangolin" (precise)
-# EOL: April 2014
-quantal = Ubuntu 12.10 "Quantal Quetzal" (quantal)
-
-[metadata]
-# base url: <url>/<src_pkg-name>/<file>
-source extracts baseurl = http://neuro.debian.net/debian/extracts
-# files to query
-source extracts filenames = upstream README.Debian copyright