sphinx/index.rst

   1 .. _WELCOme:
   2
   3 *********************************************
   4  The Ultimate Neuroscience Software Platform
   5 *********************************************
   6
   7 NeuroDebian provides a large collection of popular neuroscience research
   8 software for the Debian_ operating system as well as Ubuntu_ and other
   9 derivatives. Popular packages include :ref:`AFNI <binary_pkg_afni>`,
  10 :ref:`FSL <binary_pkg_fsl-complete>`, :ref:`PyMVPA <binary_pkg_python-mvpa2>` and
  11 :ref:`many others <pkg_tocs>`. While we do strive to maintain a high level of
  12 quality, we make no guarantee that a given package works as expected, so use
  13 them at your own risk. If you do encounter problems or you just like to say
  14 thanks, simply :ref:`send us an email <chap_contacts>`.
  15
  16 Learn more about NeuroDebian, the goals of this project, and help us |spread|!
  17
  18   Halchenko, Y. O. & Hanke, M. (2012). `Open is not enough. Let’s take the
  19   next step: An integrated, community-driven computing platform for neuroscience
  20   <http://www.frontiersin.org/Neuroinformatics/10.3389/fninf.2012.00022/full>`_.
  21   *Frontiers in Neuroinformatics*, 6:22.
  22
  23 .. raw:: html
  24
  25   <div class="linkmore"><a href="publications.html" name="publications">more publications</a></div>
  26   <div class="clearer"></div>
  27   <!-- for dynamic quote update via javascript -->
  28   <hr />
  29   <div id="randomquote" title="Feedback from the community">
  30
  31 .. quotes::
  32    :random: 1
  33
  34 .. raw:: html
  35
  36   </div><!-- randomquote -->
  37   <div class="linkmore"><a href="testimonials.html">more testimonials</a></div>
  38
  39 .. _Ubuntu: http://www.ubuntu.com
  40
  41 .. _repository_howto:
  42 .. _chap_installation:
  43
  44 Get NeuroDebian
  45 ===============
  46
  47 .. include:: reposetup.rst
  48
  49 .. _news:
  50
  51 News
  52 ====
  53
  54 .. raw:: html
  55
  56  <a class="twitter-timeline" href="https://twitter.com/NeuroDebian"
  57     data-widget-id="360194288006606848"
  58     data-link-color="#820430"
  59     height="150px"
  60     data-show-replies="false"
  61     data-chrome="noheader nofooter transparent">Tweets by @NeuroDebian</a>
  62  <script>!function(d,s,id){var js,fjs=d.getElementsByTagName(s)[0],p=/^http:/.test(d.location)?'http':'https';if(!d.getElementById(id)){js=d.createElement(s);js.id=id;js.src=p+"://platform.twitter.com/widgets.js";fjs.parentNode.insertBefore(js,fjs);}}(document,"script","twitter-wjs");</script>
  63
  64  <div class="nojavascriptinstructions">
  65  The news widget requires javascript
  66  </div>
  67
  68 .. _identi.ca: http://identi.ca/neurodebian
  69 .. _twitter: http://twitter.com/NeuroDebian
  70
  71
  72 .. raw:: html
  73
  74   <hr />
  75   <div id="sitemap">
  76   <!-- Some anchors to orient users of old-website urls -->
  77   <a name="acknowledgements"/>
  78   <a name="contacts"/>
  79   <a name="the-team"/>
  80   <a name="debian-installation"/>
  81   <a name="virtual-machine"/>
  82   <a name="ways-to-use-neurodebian">&nbsp;</a>
  83
  84 * **About**
  85 * :ref:`The Team <chap_team>`
  86 * :ref:`FAQ <faq>`
  87 * :ref:`Blog <blog>`
  88 * :ref:`chap_popularity`
  89 * :ref:`chap_publications`
  90 * :ref:`chap_acknowledgements`
  91 * :ref:`testimonials`
  92 * :ref:`coffeeart`
  93
  94 .. start a new list
  95
  96 * **Services**
  97 * :ref:`Software <pkg_tocs>`
  98 * :ref:`Data <toc_pkgs_for_release_data>`
  99 * :ref:`Appliance <chap_vm>`
 100 * :ref:`Mirrors <chap_mirrors_stats>`
 101
 102 .. start a new list
 103
 104 * **Community**
 105 * :ref:`Contacts <chap_contacts>`
 106 * :ref:`Mailing lists <chap_mailinglists>`
 107 * `OpenHatch <https://openhatch.org/+projects/NeuroDebian>`_
 108 * `Identi.ca <http://identi.ca/neurodebian>`_
 109 * `Twitter <http://twitter.com/NeuroDebian>`_
 110 * `Google+ <https://plus.google.com/104292290917252528951>`_
 111 * `YouTube <http://www.youtube.com/neurodebian>`_
 112 * `GitHub <https://github.com/neurodebian>`_
 113
 114 .. start a new list
 115
 116 * **Related**
 117 * `Debian <http://www.debian.org>`_
 118 * `Debian Med <http://www.debian.org/devel/debian-med>`_
 119 * `INCF <http://software.incf.org/software/neurodebian>`_
 120 * `NITRC <http://www.nitrc.org/projects/neurodebian>`_
 121
 122 .. raw:: html
 123
 124   </div><div class="clearer"></div>
 125   <hr />
 126
 127
 128 .. toctree::
 129    :hidden:
 130
 131    blog/index
 132    faq
 133    thanks
 134    popularity
 135    about
 136    pkgs
 137    spread
 138    vm
 139    publications
 140    coffeeart
 141    photoalbum
 142    projects
 143    testimonials
 144    testimonials-topics
 145    vm_welcome
 146    derivatives
 147
 148 .. are these supposed to be visible?
 149 .. toctree::
 150    :hidden:
 151
 152    machines
 153    todo
 154
 155 .. toctree::
 156    :hidden:
 157    :glob:
 158
 159    pkgs/*
 160    pkglists/*
 161
 162 .. probably should be purged altogether
 163 .. toctree::
 164    :hidden:
 165
 166    livecd
 167    quotes-nihr01
 168    quotes-nitrc
 169
 170 .. include:: link_names.txt
 171 .. include:: substitutions.txt
 172
 173 .. raw:: html
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