for (int k = 0; k < alignmentLength; k++) { out << F.a[k] << '\t'; } out << endl;
for (int k = 0; k < alignmentLength; k++) { out << F.t[k] << '\t'; } out << endl;
for (int k = 0; k < alignmentLength; k++) { out << F.g[k] << '\t'; } out << endl;
for (int k = 0; k < alignmentLength; k++) { out << F.c[k] << '\t'; } out << endl;
for (int k = 0; k < alignmentLength; k++) { out << F.gap[k] << '\t'; } out << endl;
for (int k = 0; k < alignmentLength; k++) { out << F.a[k] << '\t'; } out << endl;
for (int k = 0; k < alignmentLength; k++) { out << F.t[k] << '\t'; } out << endl;
for (int k = 0; k < alignmentLength; k++) { out << F.g[k] << '\t'; } out << endl;
for (int k = 0; k < alignmentLength; k++) { out << F.c[k] << '\t'; } out << endl;
for (int k = 0; k < alignmentLength; k++) { out << F.gap[k] << '\t'; } out << endl;