void doBStick(vector<double>);
};
-/**************************************************************************************************/
+//**************************************************************************************************/
/*This Class calculates the geometric series distribution for the data.
It prints the D-Statistic and the critical values for the Kolmogorov-Smirnov
1-sample test at the 95% confidence interval.*/
if (m->control_pressed) { break; }
+
+
getOTUData(listFileName);
m->mothurRemove(distFileName);
if (m->control_pressed) { break; }
+
for(int i=1;i<ncpus;i++){
MPI_Send(&numOTUs, 1, MPI_INT, i, tag, MPI_COMM_WORLD);
MPI_Send(&singleLookUp[0], singleLookUp.size(), MPI_DOUBLE, i, tag, MPI_COMM_WORLD);
NameAssignment* clusterNameMap = new NameAssignment(namesFileName);
clusterNameMap->readMap();
read->read(clusterNameMap);
-
+
ListVector* list = read->getListVector();
SparseMatrix* matrix = read->getMatrix();
string flowFileName, oligoFileName, outputDir;
-
map<string, int> barcodes;
map<string, int> primers;
vector<string> revPrimer;