-
- //remove old files so you can append later....
- string fileroot = outputDir + m->getRootName(m->getSimpleName(listfile));
- if (Groups.size() == 0) {
- remove((fileroot + "rare.list").c_str());
- remove((fileroot + "abund.list").c_str());
-
- outputNames.push_back((fileroot + "rare.list"));
- outputNames.push_back((fileroot + "abund.list"));
- outputTypes["list"].push_back((fileroot + "rare.list"));
- outputTypes["list"].push_back((fileroot + "abund.list"));
- }else{
- for (int i=0; i<Groups.size(); i++) {
- remove((fileroot + Groups[i] + ".rare.list").c_str());
- remove((fileroot + Groups[i] + ".abund.list").c_str());
-
- outputNames.push_back((fileroot + Groups[i] + ".rare.list"));
- outputNames.push_back((fileroot + Groups[i] + ".abund.list"));
- outputTypes["list"].push_back((fileroot + Groups[i] + ".rare.list"));
- outputTypes["list"].push_back((fileroot + Groups[i] + ".abund.list"));
- }
- }