moved mothur's source into a folder to make grabbing just the source easier on github

[mothur.git] / whittaker.cpp

diff --git a/whittaker.cpp b/whittaker.cpp
deleted file mode 100644 (file)
index 5ab1e5d..0000000
--- a/whittaker.cpp
+++ /dev/null
@@ -1,35 +0,0 @@
-/*
- *  whittaker.cpp
- *  Mothur
- *
- *  Created by Pat Schloss on 4/23/09.
- *  Copyright 2009 Patrick D. Schloss. All rights reserved.
- *
- */
-
-#include "whittaker.h"
-
-/***********************************************************************/
-
-EstOutput Whittaker::getValues(vector<SharedRAbundVector*> shared){
-       try{
-               data.resize(1);
-
-               int countA = 0;
-               int countB = 0;
-               int sTotal = shared[0]->getNumBins();
-               for(int i=0;i<sTotal;i++){
-                       if(shared[0]->getAbundance(i) != 0){    countA++;       }
-                       if(shared[1]->getAbundance(i) != 0){    countB++;       }               
-               }
-               
-               data[0] = 2-2*sTotal/(float)(countA+countB);
-               return data;
-       }
-       catch(exception& e) {
-               m->errorOut(e, "Whittaker", "getValues");
-               exit(1);
-       }
-}
-
-/***********************************************************************/