changed all shared commands so that they read the shared file generated by the read...

[mothur.git] / venncommand.cpp

diff --git a/venncommand.cpp b/venncommand.cpp
index e9cb47aca2c0b6291cbf57902ceb56808137704e..b2dfc89bc6ad09c283e31b15523c8a868ad01711 100644 (file)
--- a/venncommand.cpp
+++ b/venncommand.cpp
@@ -98,14 +98,6 @@ int VennCommand::execute(){
                        
                        input = globaldata->ginput;
                        lookup = input->getSharedRAbundVectors();
-               }else if (format == "shared") {
-                       //you are using a list and a groupfile
-                       read = new ReadOTUFile(globaldata->inputFileName);      
-                       read->read(&*globaldata); 
-               
-                       input = globaldata->ginput;
-                       SharedList = globaldata->gSharedList;
-                       lookup = SharedList->getSharedRAbundVector();
                }else if (format == "list") {
                        //you are using just a list file and have only one group
                        read = new ReadOTUFile(globaldata->inputFileName);