added trim.seqs command

[mothur.git] / validparameter.cpp

diff --git a/validparameter.cpp b/validparameter.cpp
index 05cdb1a1ff6829863770a05b31a2bd6e72cabc65..bd1698468116f39ec112e075e8001c47a7ef3199 100644 (file)
--- a/validparameter.cpp
+++ b/validparameter.cpp
@@ -285,6 +285,9 @@ void ValidParameters::initCommandParameters() {
                string reverseseqsArray[] =  {"fasta"};
                commandParameters["reverse.seqs"] = addParameters(reverseseqsArray, sizeof(reverseseqsArray)/sizeof(string));
 
+               string trimseqsArray[] =  {"fasta", "flip", "oligos", "forward", "reverse", "barcode"};
+               commandParameters["trim.seqs"] = addParameters(trimseqsArray, sizeof(trimseqsArray)/sizeof(string));
+
                string vennArray[] =  {"groups","line","label","calc"};
                commandParameters["venn"] = addParameters(vennArray, sizeof(vennArray)/sizeof(string));