added errorchecking and help info on new unifrac and treeclimber code

[mothur.git] / validcommands.cpp

diff --git a/validcommands.cpp b/validcommands.cpp
index 8f06fefee54330386e9fed5109603e1a2335d1e9..53ee7431b49fecc06002e5b9330259371bd35729 100644 (file)
--- a/validcommands.cpp
+++ b/validcommands.cpp
@@ -55,7 +55,7 @@ bool ValidCommands::isValidCommand(string command) {
                if ((commands.find(command)) != (commands.end())) {
                        return true;
                }else{
-                       cout << command << " is not a valid command in Mothur.  Valid commands are read.dist(), read.otu(), cluster(), collect.single(), collect.shared(), rarefaction.single(), rarefaction.shared(), summary.single(), summary.shared(), quit(), help()." << endl;
+                       cout << command << " is not a valid command in Mothur.  Valid commands are read.dist(), read.otu(), read.tree(), cluster(), deconvolute(), collect.single(), collect.shared(), rarefaction.single(), rarefaction.shared(), summary.single(), summary.shared(), parsimony(), unifrac.weighted(), unifrac.unweighted(), quit(), help()." << endl;
                        return false;
                }