]> git.donarmstrong.com Git - mothur.git/blobdiff - validcalculator.cpp
added odum, canberra, structchi2, structchord, structeuclidean, gower, hellinger...
[mothur.git] / validcalculator.cpp
index d3a641f0b9c37286d241f126e01d708a144569c6..6242d5aaf5c7e49eb54a75b26a0eb48425302123 100644 (file)
@@ -262,16 +262,22 @@ void ValidCalculators::initialShared() {
                shared["braycurtis"]                    = "braycurtis";
                shared["odum"]                                  = "odum";
                shared["canberra"]                              = "canberra";
-               shared["stricteuclidean"]               = "stricteuclidean";
-               shared["strictchord"]                   = "strictchord";
+               shared["structeuclidean"]               = "structeuclidean";
+               shared["structchord"]                   = "structchord";
                shared["hellinger"]                             = "hellinger";
                shared["manhattan"]                             = "manhattan";
-               shared["strictpearson"]                 = "strictpearson";
+               shared["structpearson"]                 = "structpearson";
                shared["soergel"]                               = "soergel";
                shared["spearman"]                              = "spearman";
-               shared["strictkulczynski"]              = "strictkulczynski";
+               shared["structkulczynski"]              = "structkulczynski";
+               shared["structchi2"]                    = "structchi2";
                shared["speciesprofile"]                = "speciesprofile";
                shared["hamming"]                               = "hamming";
+               shared["gower"]                                 = "gower";
+               shared["memchi2"]                               = "memchi2";
+               shared["memchord"]                              = "memchord";
+               shared["memeuclidean"]                  = "memeuclidean";
+               shared["mempearson"]                    = "mempearson";
                shared["default"]                   = "default";
        }
        catch(exception& e) {
@@ -369,16 +375,22 @@ void ValidCalculators::initialSharedSummary() {
                sharedsummary["braycurtis"]                             = "braycurtis";
                sharedsummary["odum"]                                   = "odum";
                sharedsummary["canberra"]                               = "canberra";
-               sharedsummary["stricteuclidean"]                = "stricteuclidean";
-               sharedsummary["strictchord"]                    = "strictchord";
+               sharedsummary["structeuclidean"]                = "structeuclidean";
+               sharedsummary["structchord"]                    = "structchord";
                sharedsummary["hellinger"]                              = "hellinger";
                sharedsummary["manhattan"]                              = "manhattan";
-               sharedsummary["strictpearson"]                  = "strictpearson";
-               sharedsummary["strictkulczynski"]               = "strictkulczynski";
+               sharedsummary["structpearson"]                  = "structpearson";
+               sharedsummary["structkulczynski"]               = "structkulczynski";
+               sharedsummary["structchi2"]                             = "structchi2";
                sharedsummary["soergel"]                                = "soergel";
                sharedsummary["spearman"]                               = "spearman";
                sharedsummary["speciesprofile"]                 = "speciesprofile";
                sharedsummary["hamming"]                                = "hamming";
+               sharedsummary["gower"]                                  = "gower";
+               sharedsummary["memchi2"]                                = "memchi2";
+               sharedsummary["memchord"]                               = "memchord";
+               sharedsummary["memeuclidean"]                   = "memeuclidean";
+               sharedsummary["mempearson"]                             = "mempearson";
                sharedsummary["default"]                                = "default";
        }
        catch(exception& e) {