working on pam

[mothur.git] / uvest.h

diff --git a/uvest.h b/uvest.h
index 3eea438a0e1ff6d6a1444785a30765a18b3fb71c..384e80c3e54102635022b62aec12e4a66ee81289 100644 (file)
--- a/uvest.h
+++ b/uvest.h
@@ -12,8 +12,6 @@
 /* This class implements the UVEst estimator on two groups. 
 It is used by sharedJAbund and SharedSorensonAbund. */
  
- 
-using namespace std;
 
 #include "mothur.h"
 #include "sharedrabundvector.h"
@@ -23,7 +21,10 @@ typedef vector<double> EstOutput;
 /***********************************************************************/
 class UVEst {
        public:
-               EstOutput getUVest(SharedRAbundVector* shared1, SharedRAbundVector* shared2);           
+               UVEst() { m = MothurOut::getInstance(); }
+               EstOutput getUVest(vector<SharedRAbundVector*>);        
+       private:
+               MothurOut* m;
 };
 /***********************************************************************/