sffinfo bug with flow grams right index when clipQualRight=0

[mothur.git] / unweighted.h

diff --git a/unweighted.h b/unweighted.h
index c6c13bb3a7abd14c824dfe6b495871790809833d..b136b007b517e56645be544ee6556f83a45de649 100644 (file)
--- a/unweighted.h
+++ b/unweighted.h
@@ -12,7 +12,7 @@
  */
 
 #include "treecalculator.h"
-#include "treemap.h"
+#include "counttable.h"
 
 /***********************************************************************/
 
@@ -38,10 +38,10 @@ class Unweighted : public TreeCalculator  {
                map< vector<string>, set<int> > rootForGrouping;  //maps a grouping combo to the roots for that combo
                bool includeRoot;
                
-               EstOutput driver(Tree*, vector< vector<string> >, int, int, TreeMap*); 
-               EstOutput createProcesses(Tree*, vector< vector<string> >, TreeMap*);
-               EstOutput driver(Tree*, vector< vector<string> >, int, int, bool, TreeMap*); 
-               EstOutput createProcesses(Tree*, vector< vector<string> >, bool, TreeMap*);
+               EstOutput driver(Tree*, vector< vector<string> >, int, int, CountTable*); 
+               EstOutput createProcesses(Tree*, vector< vector<string> >, CountTable*);
+               EstOutput driver(Tree*, vector< vector<string> >, int, int, bool, CountTable*); 
+               EstOutput createProcesses(Tree*, vector< vector<string> >, bool, CountTable*);
                int getRoot(Tree*, int, vector<string>);
 };