added bootstrap.shared command and fixed some bugs with heatmap

[mothur.git] / unifracweightedcommand.h

diff --git a/unifracweightedcommand.h b/unifracweightedcommand.h
index 751343b3f641d29799c8704d71f6684c04d504ac..5cd93a94c0dcf96547ee409d4ca641092309d2bc 100644 (file)
--- a/unifracweightedcommand.h
+++ b/unifracweightedcommand.h
@@ -39,7 +39,7 @@ class UnifracWeightedCommand : public Command {
                Tree* randT;  //random tree
                TreeMap* tmap;
                Weighted* weighted;
-               string weightedFile, weightedFileout, sumFile;
+               string sumFile;
                int iters, numGroups, numComp, counter;
                EstOutput userData;                     //weighted score info for user tree
                EstOutput randomData;           //weighted score info for random trees
@@ -59,10 +59,7 @@ class UnifracWeightedCommand : public Command {
                //void removeValidScoresDuplicates();
                int findIndex(float, int);
                void calculateFreqsCumuls();
-               //void initFile(string);
-               //void output(vector<double>);
-               //void resetFile();
-
+               
 };