added oligos, pdiffs, bdiffs, ldiffs, sdiffs, tiffs parameters to sffinfo to allow...

[mothur.git] / trimseqscommand.cpp

diff --git a/trimseqscommand.cpp b/trimseqscommand.cpp
index ae8dfb7efbb7826f40459ef87198ab72480a65ea..88ed32bd79bfcdc513ae4c848c775a95e762cd57 100644 (file)
--- a/trimseqscommand.cpp
+++ b/trimseqscommand.cpp
@@ -611,6 +611,7 @@ int TrimSeqsCommand::driverCreateTrim(string filename, string qFileName, string
                        QualityScores currQual;
                        if(qFileName != ""){
                                currQual = QualityScores(qFile);  m->gobble(qFile);
+                //cout << currQual.getName() << endl;
                        }
                        
                        string origSeq = currSeq.getUnaligned();