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[mothur.git] / trimseqscommand.cpp

diff --git a/trimseqscommand.cpp b/trimseqscommand.cpp
index 4d6b45da96664677f61908874d79b8d847f0e74c..6410c8f4cb39a32efad1f8a18e4876cec6080b9f 100644 (file)
--- a/trimseqscommand.cpp
+++ b/trimseqscommand.cpp
@@ -559,7 +559,7 @@ int TrimSeqsCommand::driverCreateTrim(string filename, string qFileName, string
                        if(qFileName != ""){
                                currQual = QualityScores(qFile);  m->gobble(qFile);
                        }
-
+                       //cout << currSeq.getName() << '\t' << currSeq.getUnaligned().length() << endl;
                        string origSeq = currSeq.getUnaligned();
                        if (origSeq != "") {
                                
@@ -1316,7 +1316,7 @@ int TrimSeqsCommand::stripBarcode(Sequence& seq, QualityScores& qual, int& group
                        if (alignment != NULL) {  delete alignment;  }
                        
                }
-               
+       
                return success;
                
        }