rechecking in

[mothur.git] / trimseqscommand.cpp

diff --git a/trimseqscommand.cpp b/trimseqscommand.cpp
index 71cf7143c55392208523c390cfb3924304eeede9..5e0a6471010f6d66dafa82037adac1fdb5ab518a 100644 (file)
--- a/trimseqscommand.cpp
+++ b/trimseqscommand.cpp
@@ -378,6 +378,7 @@ int TrimSeqsCommand::driverCreateTrim(string filename, string qFileName, string
                        
                        Sequence currSeq(inFASTA);
        cout << i << '\t' << currSeq.getName() << endl;
+
                        string origSeq = currSeq.getUnaligned();
                        if (origSeq != "") {
                                int groupBar, groupPrime;