modified reverse.seqs and qualscores.cpp

[mothur.git] / trimseqscommand.cpp

diff --git a/trimseqscommand.cpp b/trimseqscommand.cpp
index 7f82366331830baf3ca6640b2af83073662ec9f6..53bdc7e28435d8fbe5b4379fd51f8ce23a909eb6 100644 (file)
--- a/trimseqscommand.cpp
+++ b/trimseqscommand.cpp
@@ -460,7 +460,7 @@ int TrimSeqsCommand::driverCreateTrim(string filename, string qFileName, string
 
                        QualityScores currQual;
                        if(qFileName != ""){
-                               currQual = QualityScores(qFile, currSeq.getNumBases());  m->gobble(qFile);
+                               currQual = QualityScores(qFile);  m->gobble(qFile);
                        }
 
                        string origSeq = currSeq.getUnaligned();