working on make.contigs. fixed trim.seqs filename issue

[mothur.git] / trimseqscommand.cpp

diff --git a/trimseqscommand.cpp b/trimseqscommand.cpp
index 64d9d9ec161b5615ef59f3ae57429e38bdd49cdd..eb31e78ec151c7c0505bad45c16191d04520e6f1 100644 (file)
--- a/trimseqscommand.cpp
+++ b/trimseqscommand.cpp
@@ -109,7 +109,7 @@ string TrimSeqsCommand::getOutputPattern(string type) {
         else if (type == "fasta") {  pattern = "[filename],[tag],fasta"; } 
         else if (type == "group") {  pattern = "[filename],groups"; }
         else if (type == "name") {  pattern = "[filename],[tag],names"; }
-        else if (type == "count") {  pattern = "[filename],count_table"; }
+        else if (type == "count") {  pattern = "[filename],[tag],count_table"; }
         else { m->mothurOut("[ERROR]: No definition for type " + type + " output pattern.\n"); m->control_pressed = true;  }
         
         return pattern;