fixed bug in phylo.diversity rooting. added filename patterns and create filename...

[mothur.git] / trimflowscommand.h

diff --git a/trimflowscommand.h b/trimflowscommand.h
index b7fbf4342b821d1f6eb6dbb7094d94c3e85d19a3..065e6b4532e071383c39c54e38047b01a2b45344 100644 (file)
--- a/trimflowscommand.h
+++ b/trimflowscommand.h
@@ -26,8 +26,9 @@ public:
        vector<string> setParameters();
        string getCommandName()                 { return "trim.flows";  }
        string getCommandCategory()             { return "Sequence Processing";         }
-       string getOutputFileNameTag(string, string);
+       
        string getHelpString(); 
+    string getOutputPattern(string);   
        string getCitation() { return "http://www.mothur.org/wiki/Trim.flows"; }
        string getDescription()         { return "trim.flows"; }