moved mothur's source into a folder to make grabbing just the source easier on github

[mothur.git] / trialswap2.h

diff --git a/trialswap2.h b/trialswap2.h
deleted file mode 100644 (file)
index 924938b..0000000
--- a/trialswap2.h
+++ /dev/null
@@ -1,42 +0,0 @@
-#ifndef TRIALSWAP2
-#define TRIALSWAP2
-
-/*
- *  trialswap2.h
- *  Mothur
- *
- *  Created by Kathryn Iverson on June 27, 2011.
- *  Copyright 2011 Schloss Lab. All rights reserved.
- *
- */
-
-#include "mothurout.h"
-
-
-class TrialSwap2 {
-    
-public:
-    TrialSwap2(){ m = MothurOut::getInstance(); };
-    ~TrialSwap2(){};
-    
-    double calc_pvalue_lessthan (vector<double>, double);
-    double calc_pvalue_greaterthan (vector<double>, double);
-    int swap_checkerboards (vector<vector<int> > &, int, int);
-    int calc_combo (int, int, vector<vector<int> > &);
-    double calc_vratio (int, int, vector<int>, vector<int>);
-    int calc_checker (vector<vector<int> > &, vector<int>, int, int);
-    double calc_c_score (vector<vector<int> > &, vector<int>, int, int);
-    
-    
-private:
-    MothurOut* m;
-    
-    double t_test (double, int, double, vector<double>);
-    int print_matrix(vector<vector<int> > &, int, int);
-    
-    
-    
-};
-#endif
-
-