moved utilities out of mothur.h and into mothurOut class.

[mothur.git] / treemap.cpp

diff --git a/treemap.cpp b/treemap.cpp
index dcef7f7c19174f1aaf6a1435931c9005f986f638..b2fc591c0adb24820d6f603bd8016154ad1c626c 100644 (file)
--- a/treemap.cpp
+++ b/treemap.cpp
@@ -13,7 +13,7 @@
 
  TreeMap::TreeMap(string filename) {
        groupFileName = filename;
-       openInputFile(filename, fileHandle);
+       m->openInputFile(filename, fileHandle);
 }
 
 /************************************************************/
@@ -39,7 +39,7 @@ void TreeMap::readMap() {
                                seqsPerGroup[seqGroup]++;
                        }
 
-                       gobble(fileHandle);
+                       m->gobble(fileHandle);
                }
                fileHandle.close();
 }