added logfile feature

[mothur.git] / treemap.cpp

diff --git a/treemap.cpp b/treemap.cpp
index ad8a2af17ac2b8fe954c3bff402f6d1bb20381db..044e87ca6c603f8762edc863e5adf827ede73bad 100644 (file)
--- a/treemap.cpp
+++ b/treemap.cpp
@@ -116,11 +116,7 @@ bool TreeMap::isValidGroup(string groupname) {
                return false;
        }
        catch(exception& e) {
-               cout << "Standard Error: " << e.what() << " has occurred in the TreeMap class Function isValidGroup. Please contact Pat Schloss at pschloss@microbio.umass.edu." << "\n";
-               exit(1);
-       }
-       catch(...) {
-               cout << "An unknown error has occurred in the TreeMap class function isValidGroup. Please contact Pat Schloss at pschloss@microbio.umass.edu." << "\n";
+               errorOut(e, "TreeMap", "isValidGroup");
                exit(1);
        }
 }
@@ -134,11 +130,7 @@ void TreeMap::print(ostream& output){
                }
        }
        catch(exception& e) {
-               cout << "Standard Error: " << e.what() << " has occurred in the TreeMap class Function print. Please contact Pat Schloss at pschloss@microbio.umass.edu." << "\n";
-               exit(1);
-       }
-       catch(...) {
-               cout << "An unknown error has occurred in the TreeMap class function print. Please contact Pat Schloss at pschloss@microbio.umass.edu." << "\n";
+               errorOut(e, "TreeMap", "print");
                exit(1);
        }
 }
@@ -162,11 +154,7 @@ void TreeMap::makeSim(GroupMap* groupmap) {
                
        }
        catch(exception& e) {
-               cout << "Standard Error: " << e.what() << " has occurred in the TreeMap class Function makeSim. Please contact Pat Schloss at pschloss@microbio.umass.edu." << "\n";
-               exit(1);
-       }
-       catch(...) {
-               cout << "An unknown error has occurred in the TreeMap class function makeSim. Please contact Pat Schloss at pschloss@microbio.umass.edu." << "\n";
+               errorOut(e, "TreeMap", "makeSim");
                exit(1);
        }
 }
@@ -192,11 +180,7 @@ void TreeMap::makeSim(ListVector* list) {
                
        }
        catch(exception& e) {
-               cout << "Standard Error: " << e.what() << " has occurred in the TreeMap class Function makeSim. Please contact Pat Schloss at pschloss@microbio.umass.edu." << "\n";
-               exit(1);
-       }
-       catch(...) {
-               cout << "An unknown error has occurred in the TreeMap class function makeSim. Please contact Pat Schloss at pschloss@microbio.umass.edu." << "\n";
+               errorOut(e, "TreeMap", "makeSim");
                exit(1);
        }
 }