working on pam

[mothur.git] / treegroupscommand.cpp

diff --git a/treegroupscommand.cpp b/treegroupscommand.cpp
index 80698f1b4b0317719421dbe9c4af3c0583bd9d97..753b5cbe3cf7f67ed623bb8d866b848c6c96e5be 100644 (file)
--- a/treegroupscommand.cpp
+++ b/treegroupscommand.cpp
@@ -458,7 +458,7 @@ int TreeGroupCommand::execute(){
                 readMatrix->read(nameMap);
             }else if (countfile != "") {
                 ct = new CountTable();
-                ct->readTable(countfile, true);
+                ct->readTable(countfile, true, false);
                 readMatrix->read(ct);
             }else {
                 readMatrix->read(nameMap);