moved mothur's source into a folder to make grabbing just the source easier on github

[mothur.git] / treecalculator.h

diff --git a/treecalculator.h b/treecalculator.h
deleted file mode 100644 (file)
index 06abdb8..0000000
--- a/treecalculator.h
+++ /dev/null
@@ -1,46 +0,0 @@
-#ifndef TREECALCULATOR_H
-#define TREECALCULATOR_H
-
-/*
- *  treecalculator.h
- *  Mothur
- *
- *  Created by Sarah Westcott on 1/26/09.
- *  Copyright 2009 Schloss Lab UMASS Amherst. All rights reserved.
- *
- */
-
-#include "mothur.h"
-#include "tree.h"
-#include "mothurout.h"
-
-/* The tree calculator class is the parent class for tree calculators in mothur. */ 
-
-typedef vector<double> EstOutput;
-
-/***********************************************************************/
-
-class TreeCalculator {
-
-public:
-       TreeCalculator(){ m = MothurOut::getInstance(); }
-       TreeCalculator(string n) : name(n) {};
-       
-       virtual ~TreeCalculator(){};
-       virtual EstOutput getValues(Tree*) { return data; }     
-       virtual EstOutput getValues(Tree*, int, string) { return data; }        
-       virtual EstOutput getValues(Tree*, string, string) { return data; }
-       virtual EstOutput getValues(Tree*, string, string, vector<double>&) { return data; }
-       
-       virtual string getName()                {       return name;    }
-               
-protected:
-       EstOutput data;
-       string name;
-       MothurOut* m;
-
-};
-
-/***********************************************************************/
-
-#endif