added zap method to classify.seqs and changed bayesian method name to wang.

[mothur.git] / taxonomynode.h

diff --git a/taxonomynode.h b/taxonomynode.h
new file mode 100755 (executable)
index 0000000..08bad3e
--- /dev/null
+++ b/taxonomynode.h
@@ -0,0 +1,53 @@
+#ifndef TAXONOMYNODE
+#define TAXONOMYNODE
+
+/*
+ *  taxonomynode.h
+ *  
+ *
+ *  Created by Pat Schloss on 7/8/11.
+ *  Copyright 2011 Patrick D. Schloss. All rights reserved.
+ *
+ */
+
+/**************************************************************************************************/
+
+#include "mothurout.h"
+/**************************************************************************************************/
+
+class TaxonomyNode {
+       
+public:
+       TaxonomyNode();
+       TaxonomyNode(string, int);
+       void setName(string);
+       string getName();
+
+
+       void setParent(int);
+       int getParent();
+       
+       void makeChild(string, int);
+       map<string, int> getChildren();
+       int getChildIndex(string);
+       int     getNumKids();
+       int getNumSeqs();
+       void setTotalSeqs(int);
+       int getLevel();
+       
+private:
+       int parent;
+       map<string, int> children;
+       int numChildren;
+       int level;
+       
+protected:
+    MothurOut* m;
+       int numSeqs;
+       int totalSeqs;
+       string name;
+};
+
+/**************************************************************************************************/
+
+#endif