some changes while testing 1.9

[mothur.git] / taxonomyequalizer.h

diff --git a/taxonomyequalizer.h b/taxonomyequalizer.h
index e060c9e8e1f58e28b1eb083287e697a364c05268..c1e43f446f4700bd52fd1a17641759b2adbf7f27 100644 (file)
--- a/taxonomyequalizer.h
+++ b/taxonomyequalizer.h
@@ -23,7 +23,7 @@
 class TaxEqualizer  {
        
 public:
-       TaxEqualizer(string, int);
+       TaxEqualizer(string, int, string);
        ~TaxEqualizer() {};
        
        string getEqualizedTaxFile()    {       return equalizedFile;   }
@@ -31,7 +31,7 @@ public:
        
        
 private:
-       string equalizedFile, testTax;
+       string equalizedFile, testTax, outputDir;
        bool containsConfidence;
        int cutoff, highestLevel;
        map<string, int> seqLevels;  //maps name to level of taxonomy