changed label outputs for phylotype command

[mothur.git] / taxonomyequalizer.h

diff --git a/taxonomyequalizer.h b/taxonomyequalizer.h
index 6308d7168e72651f349ab3bf0a28942949063f62..9f38b2f2a29756d751f10b6b8e97b4cc3925bd00 100644 (file)
--- a/taxonomyequalizer.h
+++ b/taxonomyequalizer.h
@@ -25,13 +25,14 @@ public:
        TaxEqualizer(string, int);
        ~TaxEqualizer() {};
        
-       string getEqualizedTaxFile()    {  return equalizedFile;        }
+       string getEqualizedTaxFile()    {       return equalizedFile;   }
+       int getHighestLevel()                   {       return highestLevel;    }
        
        
 private:
        string equalizedFile, testTax;
        bool containsConfidence;
-       int cutoff;
+       int cutoff, highestLevel;
        map<string, int> seqLevels;  //maps name to level of taxonomy
        
        int getHighestLevel(ifstream&);  //scans taxonomy file to find taxonomy with highest level