changed label outputs for phylotype command

[mothur.git] / taxonomyequalizer.cpp

diff --git a/taxonomyequalizer.cpp b/taxonomyequalizer.cpp
index 37b7720de256d79e35cd415d91584fddfa05f0a6..e7fa07af76ea792137475c6dff67b2ec0c9bcf7c 100644 (file)
--- a/taxonomyequalizer.cpp
+++ b/taxonomyequalizer.cpp
@@ -17,7 +17,7 @@ TaxEqualizer::TaxEqualizer(string tfile, int c) : cutoff(c) {
                ifstream inTax;
                openInputFile(tfile, inTax);
        
-               int highestLevel = getHighestLevel(inTax);
+               highestLevel = getHighestLevel(inTax);
        
                //if the user has specified a cutoff and it's smaller than the highest level
                if ((cutoff != -1) && (cutoff < highestLevel)) { 
@@ -43,7 +43,7 @@ TaxEqualizer::TaxEqualizer(string tfile, int c) : cutoff(c) {
                        //is this a taxonomy that needs to be extended?
                        if (seqLevels[name] < highestLevel) {
                                extendTaxonomy(name, tax, highestLevel);
-                       }else if (seqLevels[name] > highestLevel) { //this can happen if hte user enters a cutoff
+                       }else if (seqLevels[name] > highestLevel) { //this can happen if the user enters a cutoff
                                truncateTaxonomy(name, tax, highestLevel);
                        }