changes while testing

[mothur.git] / systemcommand.h

diff --git a/systemcommand.h b/systemcommand.h
index 3c22773f2d9e70417c6dc3fef6a58181a16440f0..27adf7c5993289bc0edeeb9f56b8de5939b2bfb0 100644 (file)
--- a/systemcommand.h
+++ b/systemcommand.h
@@ -24,9 +24,11 @@ class SystemCommand : public Command {
                vector<string> setParameters();
                string getCommandName()                 { return "system";              }
                string getCommandCategory()             { return "General";             }
-               string getHelpString(); 
+        string getHelpString();        
+        string getOutputPattern(string){ return ""; }  
                string getCitation() { return "http://www.mothur.org/wiki/System"; }
-       
+               string getDescription()         { return "execute system commands from within mothur"; }
+
                int execute(); 
                void help() { m->mothurOut(getHelpString()); }