added citation function to commands

[mothur.git] / systemcommand.cpp

diff --git a/systemcommand.cpp b/systemcommand.cpp
index 6a1e3555f80ffd3f6f5a1565296faf4072995629..129ed8012fe92aafe37ec8946a2f3367d3da79ce 100644 (file)
--- a/systemcommand.cpp
+++ b/systemcommand.cpp
@@ -30,6 +30,7 @@ SystemCommand::SystemCommand(string option)  {
                
                //allow user to run help
                if(option == "help") { help(); abort = true; calledHelp = true; }
+               else if(option == "citation") { citation(); abort = true; calledHelp = true;}
                
                else {
                        vector<string> myArray = setParameters();