added modify names parameter to set.dir

[mothur.git] / summarysharedcommand.h

diff --git a/summarysharedcommand.h b/summarysharedcommand.h
index f486d520216bd8ec4858d50cd7f2d92b7fd23537..8ba9b9fcf3e40b745cf75ddbaccd2f6df8cde652 100644 (file)
--- a/summarysharedcommand.h
+++ b/summarysharedcommand.h
@@ -112,6 +112,7 @@ struct summarySharedData {
        unsigned long long end;
        MothurOut* m;
        string sumFile;
+    int count;
        
        summarySharedData(){}
        summarySharedData(string sf, MothurOut* mout, unsigned long long st, unsigned long long en, vector<string> est, vector<SharedRAbundVector*> lu) {
@@ -121,6 +122,7 @@ struct summarySharedData {
                end = en;
         Estimators = est;
         thisLookup = lu;
+        count=0;
        }
 };
 /**************************************************************************************************/
@@ -225,7 +227,7 @@ static DWORD WINAPI MySummarySharedThreadFunction(LPVOID lpParam){
                
                vector<SharedRAbundVector*> subset;
                for (int k = pDataArray->start; k < pDataArray->end; k++) { // pass cdd each set of groups to compare
-            
+            pDataArray->count++;
                        for (int l = 0; l < k; l++) {
                                
                                outputFileHandle << pDataArray->thisLookup[0]->getLabel() << '\t';