fixes while testing

[mothur.git] / summarysharedcommand.cpp

diff --git a/summarysharedcommand.cpp b/summarysharedcommand.cpp
index 99c62a53c0580d51859673288a7955b7347442ae..5df448fc45c43656b56e8d0a54e42f089c16adf9 100644 (file)
--- a/summarysharedcommand.cpp
+++ b/summarysharedcommand.cpp
@@ -47,6 +47,7 @@ vector<string> SummarySharedCommand::getValidParameters(){
 //**********************************************************************************************************************
 SummarySharedCommand::SummarySharedCommand(){  
        try {
+               abort = true;
                //initialize outputTypes
                vector<string> tempOutNames;
                outputTypes["summary"] = tempOutNames;