paralellized seq.error and dist.shared added some error checks to libshuff and dist...

[mothur.git] / summarysharedcommand.cpp

diff --git a/summarysharedcommand.cpp b/summarysharedcommand.cpp
index 30761e10d4a3048d1af36071471865bd793e28b7..4363eaa9523570cd56146a75805b9dfc8e65e3d7 100644 (file)
--- a/summarysharedcommand.cpp
+++ b/summarysharedcommand.cpp
@@ -580,7 +580,7 @@ int SummarySharedCommand::process(vector<SharedRAbundVector*> thisLookup, string
                                                        ifstream intemp;
                                                        m->openInputFile(tempdistFileName, intemp);
                                                        
-                                                       for (int i = 0; i < calcDists.size(); i++) {
+                                                       for (int k = 0; k < calcDists.size(); k++) {
                                                                int size = 0;
                                                                intemp >> size; m->gobble(intemp);
                                                                        
@@ -592,7 +592,7 @@ int SummarySharedCommand::process(vector<SharedRAbundVector*> thisLookup, string
                                                                        intemp >> seq1 >> seq2 >> dist;   m->gobble(intemp);
                                                                        
                                                                        seqDist tempDist(seq1, seq2, dist);
-                                                                       calcDists[i].push_back(tempDist);
+                                                                       calcDists[k].push_back(tempDist);
                                                                }
                                                        }
                                                        intemp.close();