added amova command

[mothur.git] / summarysharedcommand.cpp

diff --git a/summarysharedcommand.cpp b/summarysharedcommand.cpp
index 029ca26638830f456179f5595b3fd8300f631c70..1211ea964849ed5f06706105d033fe8e7ec85816 100644 (file)
--- a/summarysharedcommand.cpp
+++ b/summarysharedcommand.cpp
@@ -744,7 +744,7 @@ int SummarySharedCommand::driver(vector<SharedRAbundVector*> thisLookup, int sta
                                        outputFileHandle << '\t';
                                        sumCalculators[i]->print(outputFileHandle);
                                        
-                                       seqDist temp(l, k, tempdata[0]);
+                                       seqDist temp(l, k, (1.0 - tempdata[0]));
                                        calcDists[i].push_back(temp);
                                }
                                outputFileHandle << endl;