fixed bug in phylo.diversity rooting. added filename patterns and create filename...

[mothur.git] / summaryqualcommand.h

diff --git a/summaryqualcommand.h b/summaryqualcommand.h
index ac65938bc23075fc7db7cb40b9ce6d05d0d5d64e..49583b059f5380ce049ac759dd94d8d25b1c7193 100644 (file)
--- a/summaryqualcommand.h
+++ b/summaryqualcommand.h
@@ -25,8 +25,9 @@ public:
        vector<string> setParameters();
        string getCommandName()                 { return "summary.qual";                        }
        string getCommandCategory()             { return "Sequence Processing";         }
-       string getOutputFileNameTag(string, string);
+       
        string getHelpString(); 
+    string getOutputPattern(string);   
        string getCitation() { return "http://www.mothur.org/wiki/Summary.qual"; }
        string getDescription()         { return "summarize the quality of a set of sequences"; }