changes for 1.12.2

[mothur.git] / summarycommand.h

diff --git a/summarycommand.h b/summarycommand.h
index 6f04fc721ad109545aa899b0a85871982bdc3c80..6b3fa69c67e46cd92d44f0064404d2743dd29b7a 100644 (file)
--- a/summarycommand.h
+++ b/summarycommand.h
@@ -35,7 +35,7 @@ private:
        SAbundVector* sabund;
        int abund, size;
 
-       bool abort, allLines;
+       bool abort, allLines, groupMode;
        set<string> labels; //holds labels to be used
        string label, calc, outputDir;
        vector<string>  Estimators;
@@ -43,6 +43,7 @@ private:
        vector<string> groups;
        
        vector<string> parseSharedFile(string);
+       string createGroupSummaryFile(int, int, vector<string>);
 
 
 };