paralellized summary.shared

[mothur.git] / summarycommand.cpp

diff --git a/summarycommand.cpp b/summarycommand.cpp
index 208544adf1bd7ec2f0f59603c4eb86840275cf80..638119543480ffe0a8364379edfef0b184c526bf 100644 (file)
--- a/summarycommand.cpp
+++ b/summarycommand.cpp
@@ -100,7 +100,7 @@ SummaryCommand::SummaryCommand(string option)  {
                        temp = validParameter.validFile(parameters, "size", false);                     if (temp == "not found") { temp = "0"; }
                        convert(temp, size); 
                        
-                       temp = validParameter.validFile(parameters, "groupmode", false);                if (temp == "not found") { temp = "F"; }
+                       temp = validParameter.validFile(parameters, "groupmode", false);                if (temp == "not found") { temp = "T"; }
                        groupMode = m->isTrue(temp);
                        
        
@@ -123,7 +123,7 @@ void SummaryCommand::help(){
                m->mothurOut("Example summary.single(label=unique-.01-.03, calc=sobs-chao-ace-jack-bootstrap-shannon-npshannon-simpson).\n");
                validCalculator->printCalc("summary", cout);
                m->mothurOut("The default value calc is sobs-chao-ace-jack-shannon-npshannon-simpson\n");
-               m->mothurOut("If you are running summary.single with a shared file and would like your summary results collated in one file, set groupmode=t. (Default=False).\n");
+               m->mothurOut("If you are running summary.single with a shared file and would like your summary results collated in one file, set groupmode=t. (Default=true).\n");
                m->mothurOut("The label parameter is used to analyze specific labels in your input.\n");
                m->mothurOut("Note: No spaces between parameter labels (i.e. label), '=' and parameters (i.e.yourLabels).\n\n");
        }