modified some calculators and other stuff - pds

[mothur.git] / summarycommand.cpp

diff --git a/summarycommand.cpp b/summarycommand.cpp
index 8632ad4a42c9c9dba91bcccf6528e7ced436f70b..39972cef649a1c34443b0ae36117a48f8b776cbd 100644 (file)
--- a/summarycommand.cpp
+++ b/summarycommand.cpp
@@ -22,6 +22,7 @@
 #include "qstat.h"
 #include "bergerparker.h"
 #include "bstick.h"
+#include "coverage.h"
 
 //**********************************************************************************************************************
 
@@ -37,9 +38,11 @@ SummaryCommand::SummaryCommand(){
                                        sumCalculators.push_back(new Sobs());
                                }else if(globaldata->Estimators[i] == "chao"){
                                        sumCalculators.push_back(new Chao1());
-                               }else if(globaldata->Estimators[i] == "geom"){
+                               }else if(globaldata->Estimators[i] == "coverage"){
+                                       sumCalculators.push_back(new Coverage());
+                               }else if(globaldata->Estimators[i] == "geometric"){
                                        sumCalculators.push_back(new Geom());
-                               }else if(globaldata->Estimators[i] == "logsd"){
+                               }else if(globaldata->Estimators[i] == "logseries"){
                                        sumCalculators.push_back(new LogSD());
                                }else if(globaldata->Estimators[i] == "qstat"){
                                        sumCalculators.push_back(new QStat());