]> git.donarmstrong.com Git - mothur.git/blobdiff - summarycommand.cpp
1.23.0
[mothur.git] / summarycommand.cpp
index 629750bbccb5ed027edf5ef53dbba3686ddb4bba..022b174a5c21f4de6f26c2dcd8232b0744da8120 100644 (file)
@@ -231,10 +231,10 @@ SummaryCommand::SummaryCommand(string option)  {
 
                        string temp;
                        temp = validParameter.validFile(parameters, "abund", false);            if (temp == "not found") { temp = "10"; }
-                       convert(temp, abund); 
+                       m->mothurConvert(temp, abund); 
                        
                        temp = validParameter.validFile(parameters, "size", false);                     if (temp == "not found") { temp = "0"; }
-                       convert(temp, size); 
+                       m->mothurConvert(temp, size); 
                        
                        temp = validParameter.validFile(parameters, "groupmode", false);                if (temp == "not found") { temp = "T"; }
                        groupMode = m->isTrue(temp);