added fasta method to cluster.split

[mothur.git] / splitmatrix.h

diff --git a/splitmatrix.h b/splitmatrix.h
index b98bdfb4b56b952d9ca0a2c7a784c22f02671e94..acaa8c5b711a220e76e48be2fc983122514d6b32 100644 (file)
--- a/splitmatrix.h
+++ b/splitmatrix.h
@@ -20,7 +20,7 @@ class SplitMatrix  {
        public:
 
                SplitMatrix(string, string, string, float, string, bool); //column formatted distance file, namesfile, cutoff, method, large
-               SplitMatrix(string, string, string, float, string, int); //fastafile, namefile, taxFile, cutoff, method, processors
+               SplitMatrix(string, string, string, float, string, int, string); //fastafile, namefile, taxFile, cutoff, method, processors, outputDir
                
                ~SplitMatrix();
                int split();
@@ -30,7 +30,7 @@ class SplitMatrix  {
        private:
                MothurOut* m;
 
-               string distFile, namefile, singleton, method, taxFile, fastafile;
+               string distFile, namefile, singleton, method, taxFile, fastafile, outputDir;
                vector< map< string, string> > dists;
                float cutoff;
                bool large;