added multiple processors option for Windows users to align.seqs, dist.seqs, summary...

[mothur.git] / splitgroupscommand.cpp

diff --git a/splitgroupscommand.cpp b/splitgroupscommand.cpp
index 00d9a9dc17b710467559bf598c988426ef5f3099..530df68d972cbf70f1b99b867780de5f28a70a4d 100644 (file)
--- a/splitgroupscommand.cpp
+++ b/splitgroupscommand.cpp
@@ -167,7 +167,8 @@ int SplitGroupCommand::execute(){
                groupMap = new GroupMap(groupfile);
                groupMap->readMap();
                
-               SharedUtil util;  util.setGroups(Groups, groupMap->namesOfGroups);  
+               vector<string> namesGroups = groupMap->getNamesOfGroups();
+               SharedUtil util;  util.setGroups(Groups, namesGroups);  
                
                if (namefile != "") {  readNames();  }
                splitFasta();