added multiple processors option for Windows users to align.seqs, dist.seqs, summary...

[mothur.git] / splitabundcommand.cpp

diff --git a/splitabundcommand.cpp b/splitabundcommand.cpp
index 29ffdb44c16862994993566583393c0de9f6644a..140f37909039c4eb44580c745d1886a1534d78d9 100644 (file)
--- a/splitabundcommand.cpp
+++ b/splitabundcommand.cpp
@@ -181,7 +181,7 @@ SplitAbundCommand::SplitAbundCommand(string option)  {
                        groups = validParameter.validFile(parameters, "groups", false);         
                        if (groups == "not found") { groups = ""; }
                        else if (groups == "all") { 
-                               if (groupfile != "") {  Groups = groupMap->namesOfGroups;  } 
+                               if (groupfile != "") {  Groups = groupMap->getNamesOfGroups();  } 
                                else {  m->mothurOut("You cannot select groups without a valid groupfile, I will disregard your groups selection. "); m->mothurOutEndLine(); groups = "";   }
                        }else { 
                                m->splitAtDash(groups, Groups);