tracking down chimera.slayer issue

[mothur.git] / slayer.cpp

diff --git a/slayer.cpp b/slayer.cpp
index fab457bc8f3e7948271190a55ac519ef0d1cd06d..ba1bf337d4084e58416b06c48cb6a359bb5b05b1 100644 (file)
--- a/slayer.cpp
+++ b/slayer.cpp
@@ -56,7 +56,8 @@ string Slayer::getResults(Sequence* query, vector<Sequence*> refSeqs) {
                                        int numSNPSRight = snpsRight.size();
                                        
                                        //require at least 3 SNPs on each side of the break
-                                       if ((numSNPSLeft >= 3) && (numSNPSRight >= 3)) {
+//                                     if ((numSNPSLeft >= 3) && (numSNPSRight >= 3)) {
+                                       if ((numSNPSLeft >= 4) && (numSNPSRight >= 4)) {
                                        
                                                //removed in 12/09 version of chimeraSlayer
                                                //int winSizeLeft = divs[k].winLEnd - divs[k].winLStart + 1;