working on search=dist in chimera.slayer

[mothur.git] / slayer.cpp

diff --git a/slayer.cpp b/slayer.cpp
index 61b7b6341c6cfaaf7adf5158cfe5248c59507388..8e17f87b109500f34abb0aa573b263627011c19a 100644 (file)
--- a/slayer.cpp
+++ b/slayer.cpp
@@ -61,16 +61,16 @@ string Slayer::getResults(Sequence* query, vector<Sequence*> refSeqs) {
                                                
                                                
                                                //are we within 10 points of the bootstrap cutoff?
-                                               if ((divs[k].bsMax >= (minBS-10)) && (iters < 1000)) {
-                                                       bootstrapSNPS(snpsLeft, snpsRight, BS_A, BS_B, 1000);
-                                                               
-                                                       if (m->control_pressed) { delete q; delete leftParent; delete rightParent; return "no"; }
-                                                               
-                                                       divs[k].bsa = BS_A;
-                                                       divs[k].bsb = BS_B;
-                                                       divs[k].bsMax = max(BS_A, BS_B);
-                                                       divs[k].chimeraMax = max(divs[k].qla_qrb, divs[k].qlb_qra);
-                                               }
+//                                             if ((divs[k].bsMax >= (minBS-10)) && (iters < 1000)) {
+//                                                     bootstrapSNPS(snpsLeft, snpsRight, BS_A, BS_B, 1000);
+//                                                             
+//                                                     if (m->control_pressed) { delete q; delete leftParent; delete rightParent; return "no"; }
+//                                                             
+//                                                     divs[k].bsa = BS_A;
+//                                                     divs[k].bsb = BS_B;
+//                                                     divs[k].bsMax = max(BS_A, BS_B);
+//                                                     divs[k].chimeraMax = max(divs[k].qla_qrb, divs[k].qlb_qra);
+//                                             }
                                                
                                                //so results reflect orignal alignment
                                                divs[k].winLStart = spots[divs[k].winLStart];