modified chimera.slayer bootstrap to bump up to 1000 on borderline bootstrap values

[mothur.git] / slayer.cpp

diff --git a/slayer.cpp b/slayer.cpp
index c4e199febb64b0b38e683bc41c7863c61bc9ba31..88f9c1c63a80217d548ea7f7ba561df7027ba6a7 100644 (file)
--- a/slayer.cpp
+++ b/slayer.cpp
@@ -66,7 +66,7 @@ string Slayer::getResults(Sequence* query, vector<Sequence*> refSeqs) {
                                                
                                                
                                                //are we within 10 points of the bootstrap cutoff?
-                                               if (divs[k].bsMax >= (minBS-10)) {
+                                               if ((divs[k].bsMax >= (minBS-10)) && (iters < 1000)) {
                                                        snpsLeft = getSNPS(divs[k].parentA.getAligned(), divs[k].querySeq.getAligned(), divs[k].parentB.getAligned(), divs[k].winLStart, divs[k].winLEnd);
                                                        snpsRight = getSNPS(divs[k].parentA.getAligned(), divs[k].querySeq.getAligned(), divs[k].parentB.getAligned(), divs[k].winRStart, divs[k].winREnd);