changing command name classify.shared to classifyrf.shared

[mothur.git] / shhhseqscommand.h

diff --git a/shhhseqscommand.h b/shhhseqscommand.h
index 4da1a840c7d3c591f589ad6ea0103da4d9fbf1ce..ffd72b9ebdc161291f9705333f018cb56c09559c 100644 (file)
--- a/shhhseqscommand.h
+++ b/shhhseqscommand.h
@@ -77,7 +77,7 @@ struct shhhseqsData {
        MothurOut* m;
        int start;
        int end;
-       int sigma, threadID;
+       int sigma, threadID, count;
        vector<string> groups;
        vector<string> mapfileNames;
        
@@ -95,6 +95,7 @@ struct shhhseqsData {
                sigma = s;
                threadID = tid;
                groups = gr;
+        count=0;
        }
 };
 
@@ -113,6 +114,8 @@ static DWORD WINAPI MyShhhSeqsThreadFunction(LPVOID lpParam){
                //precluster each group
                for (int k = pDataArray->start; k < pDataArray->end; k++) {
                        
+            pDataArray->count++;
+            
                        int start = time(NULL);
                        
                        if (pDataArray->m->control_pressed) {  return 0; }