added adjust parameter to mgcluster. fixed bug in classify.otu with countable. fixed...

[mothur.git] / shhhercommand.cpp

diff --git a/shhhercommand.cpp b/shhhercommand.cpp
index 9bd437ad3cb7b2a75b69770769c8ddbc942f4a35..b25b9def28ffc13df0a2d0736fb69e427c9d0c62 100644 (file)
--- a/shhhercommand.cpp
+++ b/shhhercommand.cpp
@@ -2727,7 +2727,8 @@ int ShhherCommand::cluster(string filename, string distFileName, string namesFil
         
                RAbundVector* rabund = new RAbundVector(list->getRAbundVector());
                
-               Cluster* cluster = new CompleteLinkage(rabund, list, matrix, cutoff, "furthest"); 
+        float adjust = -1.0;
+               Cluster* cluster = new CompleteLinkage(rabund, list, matrix, cutoff, "furthest", adjust);
                string tag = cluster->getTag();
                
                double clusterCutoff = cutoff;